Publications

PEER REVIEWED PUBLICATIONS

Fadum, JM, X Sun, and EJ Zakem. Submitted. “Redox-constrained microbial ecology dictates nitrogen loss versus retention”. Preprint available at: https://www.biorxiv.org/cgi/content/short/2025.07.14.664727v1

Ennis, A*, JE Rush*, EG Prileson, S Hodgkins, JM Fadum, H Delgadillo, F Taiwo, Z Li, W Riley, S Werts, and V Rich. Submitted. “The EMERGing Picture: Model Ecosystems as a Framework for Addressing Global Change”. 

Fadum, JM, MRV Ross, EA Tenorio, CA Barby, and EK Hall. 2025 “Nutrient loading from a sustainably certified aquaculture operation dwarfs annual nutrient inputs from a large multi-use watershed, Lake Yojoa, Honduras”. Earth’s Future 13(3), e2024EF004807, https://doi.org/10.1029/2024EF004807

Fadum, JM, B Steele, MRV Ross, and EK Hall. 2025.“Coordinated in situ lake sampling concurrent with satellite acquisition days provides a mechanism for addressing data scarcity: A case study from Lake Yojoa, Honduras”. Acta Limnologica Brasiliensia 37, e2,  http://doi.org/10.1590/S2179-975X6924

Fadum, JM, EK Hall, E Litchman, and EJ Zakem. 2024. “Aquaculture as a global perturbation experiment”. Limnology & Oceanography Letters 9(4), 317-323, https://doi.org/10.1002/lol2.10384

Fadum, JM, MA Borton, RA Daly, KC Wrighton, and EK Hall. 2024. “Nitrogen metabolisms of warm, anoxic waters revealed using genome resolved metatranscriptomics”. mSystems 9(2), e01059-23, https://doi.org/10.1128/msystems.01059-23   

Fadum, JM and EK Hall. 2023. “Nitrogen is unlikely to consistently limit primary productivity in most tropical lakes”. Ecosphere 14(3), e4451, https://doi.org/10.1002/ecs2.4451

Fadum, JM, MN Waters, and EK Hall. 2023. “Trophic state resilience to hurricane disturbance of Lake Yojoa, Honduras. Scientific Reports 13(1), e5681, https://doi.org/10.1038/s41598-023-32712-3

Fadum, JM and EK Hall. 2022. “The interaction of physical structure and nutrient loading drives ecosystem change in a large tropical lake over 40 years”. Science of The Total Environment, 830, e154454, https://doi.org/10.1016/j.scitotenv.2022.154454

CODE | DATA PRODUCTS | NON-PEER REVIEWED PUBLICATIONS

Fadum, JM. 2025. “More Than Just a Pretty Picture: Lessons Learned From Working With a Science Communicator to Create the L&O Bulletin's May Cover Art”. Limnology and Oceanography: Bulletin 34(3), Early View, https://doi.org/10.1002/lob.10712 

Fadum, JM, MRV Ross. 2024. Nutrient loading from a sustainably certified aquaculture operation dwarfs annual nutrient inputs from a large multi-use watershed, Lake Yojoa, Honduras [Code]. Zenodo. 10.5281/zenodo.14079875

Fadum, JM, MRV Ross, EA Tenorio, CA Barby, and EK Hall. 2024. Nutrient loading from a sustainably certified aquaculture operation dwarfs annual nutrient inputs from a large multi-use watershed, Lake Yojoa, Honduras [Dataset]. Zenodo. 10.5281/zenodo.14036990

Cagel, S, JM Fadum, L Jansen, S Burnet, and M Pace. 2024. “Evaluating mentorship in the aquatic sciences in the context of a global pandemic (COVID-19)”. Limnology and Oceanography: Bulletin. http://doi.org/10.1002/lob.10635  

Steele, B, JM Fadum, EK Hall, K Willi, and MRV Ross. 2023. “Processing pipeline for estimating Secchi depth at Lake Yojoa, Honduras from remote sensing products (Version v1)”. Zenodo. https://doi.org/10.5281/zenodo.8139922

Fadum, JM, MA Borton, RA Daly, KC Wrighton, and EK Hall. 2023. “Dominant nitrogen metabolisms of a tropical monomictic lake identified using genome resolved metatranscriptomics [Data set]”. Zenodo. https://doi.org/10.5281/zenodo.8035120